Jeff Urbach

2012
Direct visualization of shear dependent silk fibrillogenesis, Holland, C., Urbach J. S., and Blair D. L. , Soft Matter, 2012, Volume 8, Issue 9, p.2590, (2012)
Strength in the Periphery: Growth Cone Biomechanics and Substrate Rigidity Response in Peripheral and Central Nervous System Neurons, Koch, Daniel, Rosoff William J., Jiang Jiji, Geller Herbert M., and Urbach J. S. , Biophysical Journal, 2/2012, Volume 102, Issue 3, p.452 - 460, (2012)
2011
Four-dimensional structural dynamics of sheared collagen networks, Arevalo, Richard C., Urbach J. S., and Blair Daniel L. , Chaos: An Interdisciplinary Journal of Nonlinear Science, 2011, Volume 21, Issue 4, p.041102, (2011)
2010
Event Ordering in Live-Cell Imaging Determined from Temporal Cross-Correlation Asymmetry, Sisan, D. R., Yarar D., Waterman C. M., and Urbach J. S. , Biophysical Journal , Volume 98, p.2432-2441 , (2010)
Localized Alteration of Microtubule Polymerization in Response to Guidance Cues , Kelly, Terri-Ann N., Katagiri Yasuhiro, Vartanian Keri B., Kumar Pramukta, Chen Inn-Inn, Rosoff William J., Urbach J. S., and Geller Herbert M. , Journal of Neuroscience Research, Volume 88, p.3024-3033, (2010)
Size-Dependent Rheology of Type-I Collagen Networks, Arevalo, Richard C., Urbach J. S., and Blair Daniel L. , Biophysical Journal, Volume 99, p.L65-L67, (2010)
2009
Chloroquine Transport in Plasmodium falciparum . 1. Influx and Efflux Kinetics for Live Trophozoite Parasites Using a Novel Fluorescent Chloroquine Probe, Cabrera, Mynthia, Natarajan Jayakumar, Paguio Michelle F., Wolf Christian, Urbach J. S., and Roepe Paul D. , Biochemistry, Volume 48, Issue 40, p.9471 - 9481, (2009)
The effects of forcing and dissipation on phase transitions in thin granular layers, Lobkovsky, A. E., Reyes Vega F., and Urbach J. S. , EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS , Volume 179, p.113-122 , (2009)
Optical neuronal guidance in three-dimensional matrices, Graves, C. E., McAllister R. G., Rosoff W. J., and Urbach J. S. , Journal of Neuroscience Methods, Volume 179, Issue 2, p.278 - 283, (2009)
Quantitative Studies of Neuronal Chemotaxis in 3D, Rosoff, William J., McAllister Ryan G., Goodhlll G. J., and Urbach J. S. , Methods in Molecular Biology: Chemotaxis, Volume 571, Totowa, NJ, p.239 - 254, (2009)
Steady base states for Navier–Stokes granular hydrodynamics with boundary heating and shear, Vega Reyes, F., and Urbach J. S. , Journal of Fluid Mechanics, Volume 636, p.279, (2009)
2008
Design and optimization of a high-speed, high-sensitivity, spinning disk confocal microscopy system, McAllister, R. G., Sisan D. R., and Urbach J. S. , Journal of Biomedical Optics, Sep-Oct, Volume 13, Issue 5, (2008) Abstract
Effect of inelasticity on the phase transitions of a thin vibrated granular layer, Reyes, F. V., and Urbach J. S. , Physical Review E, Nov, Volume 78, Issue 5, (2008) Abstract
Comment on "long-lived giant number fluctuations in a swarming granular nematic", Aranson, I. S., Snezhko A., Olafsen J. S., and Urbach J. S. , Science, May, Volume 320, Issue 5876, (2008)
2007
Depletion force in a bidisperse granular layer, Melby, P., Prevost A., Egolf D. A., and Urbach J. S. , Physical Review E, Nov, Volume 76, Issue 5, (2007) Abstract
2006
Spinning disk confocal microscopy of live, intraerythrocytic malarial parasites. 1. Quantification of hemozoin development for drug sensitive versus resistant malaria, Gligorijevic, B., McAllister R. G., Urbach J. S., and Roepe P. D. , Biochemistry, Oct, Volume 45, Issue 41, p.12400-12410, (2006) Abstract
Spinning disk confocal microscopy of live, intraerythrocytic malarial parasites. 2. Altered vacuolar volume regulation in drug resistant malaria, Gligorijevic, B., Bennett T., McAllister R. G., Urbach J. S., and Roepe P. D. , Biochemistry, Oct, Volume 45, Issue 41, p.12411-12423, (2006) Abstract
Spatially resolved fluorescence correlation spectroscopy using a spinning disk confocal microscope, Sisan, D. R., Arevalo R., Graves C., McAllister R. G., and Urbach J. S. , Biophysical Journal, Dec, Volume 91, Issue 11, p.4241-4252, (2006) Abstract
2005
Generating controlled molecular gradients in 3D gels, Rosoff, W. J., McAllister R. G., Esrick M. A., Goodhill G. J., and Urbach J. S. , Biotechnology and Bioengineering, Sep, Volume 91, Issue 6, p.754-759, (2005) Abstract
Adaptation is not required to explain the long-term response of axons to molecular gradients, Xu, J., Rosoff W. J., Urbach J. S., and Goodhill G. J. , Development, Oct, Volume 132, Issue 20, p.4545-4552, (2005) Abstract
The dynamics of thin vibrated granular layers, Melby, P., Reyes F. V., Prevost A., Robertson R., Kumar P., Egolf D. A., and Urbach J. S. , Journal of Physics-Condensed Matter, Jun, Volume 17, Issue 24, p.S2689-S2704, (2005) Abstract
Two-dimensional melting far from equilibrium in a granular monolayer, Olafsen, J. S., and Urbach J. S. , Physical Review Letters, Aug, Volume 95, Issue 9, (2005) Abstract
2004
Nonequilibrium two-phase coexistence in a confined granular layer, Prevost, A., Melby P., Egolf D. A., and Urbach J. S. , Physical Review E, Nov, Volume 70, Issue 5, (2004) Abstract
Predicting axonal response to molecular gradients with a computational model of filopodial dynamics, Goodhill, G. J., Gu M., and Urbach J. S. , Neural Computation, Nov, Volume 16, Issue 11, p.2221-2243, (2004) Abstract
A new chemotaxis assay shows the extreme sensitivity of axons to molecular gradients, Rosoff, W. J., Urbach J. S., Esrick M. A., McAllister R. G., Richards L. J., and Goodhill G. J. , Nature Neuroscience, Jun, Volume 7, Issue 6, p.678-682, (2004) Abstract